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Washington University Department of Biology

Collected Publications - 2006

Return to top Biology Dept. Collected Publications page

Proxy Server Login for Off-Campus Access to many resources below.

Faculty names are in bold type.

Paper copies of these articles will be available in the Biology Library except where [missing from collected volume] is noted.

  1. Allen GE. 2006. The origins of theoretical population genetics.by William Provine. [book review] Hist Philos Life Sci 28: 113-114.
  2. Anderson CD, Talcott M. 2006. Clinical practice versus field surgery: a discussion of the regulations and logistics of implanting radiotransmitters in snakes. Wildlife Soc Bull 34:1470-1471. Abstract & fulltext for BioOne subscribers.
  3. Anderson CD. 2006. Utility of a set of microsatellite primers developed for the massasauga rattlesnake (Sistrurus catenatus) for population genetic studies of the timber rattlesnake (Crotalus horridus). Mol Ecol Notes 6: 514-517. Abstract & fulltext for subscribers.
  4. Aton SJ, Huettner JE, Straume M, Herzog ED. 2006. GABA and Gi/o differentially control circadian rhythms and synchrony in clock neurons. Proc Natl Acad Sci U S A 103(50):19188-93. PubMed abstract & fulltext for subscribers; free 6 mos. after publication.
  5. Bazzini AA, Asurmendi S, Hopp HE, Beachy RN. 2006. Tobacco mosaic virus (TMV) and potato virus X (PVX) coat proteins confer heterologous interference to PVX and TMV infection, respectively. J Gen Virol 87:1005-12. PubMed abstract & fulltext for subscribers.
  6. Beaster-Jones L, Horton AC, Gibson-Brown JJ, Holland ND, Holland LZ. 2006. The amphioxus T-box gene, AmphiTbx15/18/22, illuminates the origins of chordate segmentation. Evol Develop 8: 119-129. Abstract & fulltext for subscribers.
  7. Beck JB, Al-Shehbaz IA, Schaal BA. 2006.Leavenworthia (Brassicaceae) revisited: Testing classic systematic and mating system hypotheses. Systematic Botany 31: 151-159. Abstract & fulltext for subscribers.
  8. Boyce MS, Haridas CV, Lee CT, The NCEAS Stochastic Demography Working Group. [Working Group includes Knight TM] 2006. Demography in an increasingly variable world. Trends Ecol Evol 21:141-8. PubMed abstract & fulltext for subscribers.
  9. Brandi ML, Collin-Osdoby P. 2006. Vascular biology and the skeleton. J Bone Mineral Res 21: 183-192. Abstract & fulltext for subscribers.
  10. Brisson JA, Wilder J, Hollocher H. 2006. Phylogenetic analysis of the cardini group of Drosophila with respect to changes in pigmentation. Evolution 60: 1228-1241. Abstract & fulltext for BioOne subscribers.
  11. Buchko GW, Ni S, Robinson H, Welsh EA, Pakrasi HB, Kennedy MA. 2006. Characterization of two potentially universal turn motifs that shape the repeated five-residues fold--crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142. Protein Sci 15:2579-95. PubMed abstract & fulltext for subscribers, free 1 year after publication.
  12. Buchko GW, Robinson H, Ni S, Pakrasi HB, Kennedy MA. 2006. Cloning, expression, crystallization and preliminary crystallographic analysis of a pentapeptide-repeat protein (Rfr23) from the bacterium Cyanothece 51142. Acta Crystallograph Sect F Struct Biol Cryst Commun 62:1251-4. PubMed abstract & fulltext for subscribers.
  13. Calsbeek R, Knouft JH, Smith TB. 2006. Variation in scale numbers is consistent with ecologically based natural selection acting within and between lizard species. Evol Ecol 20: 377-394. Abstract & fulltext for subscribers.
  14. Chase JM, Knight TM. 2006. Effects of eutrophication and snails on Eurasian watermilfoil (Myriophyllum spicatum) invasion. Biological Invasions 8: 1643-1649. Abstract & fulltext for subscribers.
  15. Chase JM. 2006. Out from the ooze. Aquatic food webs:an ecosystem approach. by A. Belgrano. [Book review] Trends Ecol Evol 21: 122. Fulltext for subscribers.
  16. Chiang TY, Schaal BA. 2006. Phylogeography of plants in Taiwan and the Ryukyu archipelago. Taxon 55: 31-41. Abstract & fulltext for subscribers.
  17. Chiang YC, Hung KH, Schaal BA, Ge XJ, Hsu TW, Chiang TY. 2006. Contrasting phylogeographical patterns between mainland and island taxa of the Pinus luchuensis complex. Mol Ecol 15: 765-779. Abstract & fulltext for subscribers.
  18. Cho SH, Hoang QT, Kim YY, Shin HY, Ok SH, Bae JM, Shin JS. 2006. Proteome analysis of gametophores identified a metallothionein involved in various abiotic stress responses in Physcomitrella patens. Plant Cell Rep 25: 475-488. Abstract & fulltext for subscribers.
  19. Cove DJ, Quatrano RS. 2006. Agravitropic mutants of the moss Ceratodon purpureus do not complement mutants having a reversed gravitropic response. Plant Cell Environ 29:1379-1387. PubMed abstract & fulltext for subscribers, free after 7/09.
  20. Cove D, Benzanilla M, Harries P, Quatrano R. 2006. Mosses as model systems for the study of metabolism and development. Annu Rev Plant Biol 57:497-520. PubMed abstract & fulltext for subscribers.
  21. Dai S, Zhang Z, Bick J, Beachy RN. 2006. Essential role of the Box II cis element and cognate host factors in regulating the promoter of Rice tungro bacilliform virus. J Gen Virol 87:715-22. PubMed abstract & fulltext for subscribers.
  22. Damschen EI, Haddad NM, Orrock JL, Tewksbury JJ, Levey DJ. 2006. Corridors increase plant species richness at large scales. Science 313:1284-1286. Abstract & fulltext for subscribers.
  23. Duncan L, Nishii I, Howard A, Kirk D, Miller SM. 2006. Orthologs and paralogs of regA, a master cell-type regulatory gene in Volvox carteri. Curr Genet 50:61-72. PubMed abstract & fulltext for subscribers.
  24. Earley K, Lawrence RJ, Pontes O, Reuther R, Enciso AJ, Silva M, Neves N, Gross M, Viegas W, Pikaard CS. 2006. Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance. Genes Dev 20:1283-93. PubMed abstract & fulltext for subscribers, free after 5/07.
  25. Earley KW, Haag JR, Pontes O, Opper K, Juehne T, Song K, Pikaard CS. 2006. Gateway-compatible vectors for plant functional genomics and proteomics. Plant J 45:616-29. Abstract & fulltext for subscribers, free after 2/07.
  26. Eissenberg JC, Elgin SCR. 2006. Marking time. Nature Genetics 38: 276-277. Abstract & fulltext for subscribers.
  27. Feissner RE, Richard-Fogal, CL, Frawley ER, Kranz RG. 2006. ABC transporter-mediated release of a haem chaperone allows cytochrome c biogenesis. Mol Micro 61:219-231. PubMed abstract & fulltext for subscribers, free after 12/07; Supplementary Material.
  28. Feissner RE, Richard-Fogal CL, Frawley ER, Loughman JA, Earley KW, Kranz RG. 2006. Recombinant cytochromes c biogenesis systems I and II and analysis of haem delivery pathways in Escherichia coli. Mol Micro 60: 563-577. PubMed abstract & fulltext for subscribers; freely available after 11/07.
  29. Fitzsimmons K, Curran M, Kranz R. 2006. Characterization of Gal4-mediated driver lines. Poster abstract no. 384, p. 155. 17th International Conference on Arabidopsis Research, June 28 - July 2, 2006, University of Wisconsin-Madison. Freely available abstract.
  30. Frank DJ, Martin SR, Gruender BN, Lee YS, Simonette RA, Bayley PM, Miller KG, Beckingham KM. 2006. Androcam is a tissue-specific light chain for myosin VI in the Drosophila testis. J Biol Chem 281:24728-36. PubMed abstract & freely available fulltext..
  31. Frank DJ, Hopmann R, Lenartowska M, Miller KG. 2006. Capping protein and the Arp2/3 complex regulate non-bundle actin filament assembly to indirectly control actin bundle positioning during Drosophila melanogaster bristle development. Mol Biol Cell 17:3930-9. PubMed abstract & fulltext for subscribers, free 6 months after publication.
  32. Fujiki M, Kawakami S, Kim RW, Beachy RN. 2006. Domains of tobacco mosaic virus movement protein essential for its membrane association. J Gen Virol 87:2699-707. PubMed abstract & fulltext for subscribers.
  33. Granados-Fuentes D, Tseng A, Herzog ED. 2006. A circadian clock in the olfactory bulb controls olfactory responsivity. J Neurosci 26:12219-25. PubMed abstract & fulltext for subscribers; free after 5/07.
  34. Hammes UZ, Nielsen E, Honaas LA, Taylor CG, Schachtman DP. 2006. AtCAT6, a sink-tissue-localized transporter for essential amino acids in Arabidopsis. Plant J 48:414-26. PubMed abstract & fulltext for subscribers, free after 5/08.
  35. Harmon LJ, Gibson R. 2006. Multivariate phenotypic evolution among island and mainland populations of the ornate day gecko, Phelsuma ornata. Evolution 60:2622-32. Abstract & fulltext for BioOne subscribers.
  36. Haydel SE, Clark-Curtiss JE. 2006. The Mycobacterium tuberculosis TrcR response regulator represses transcription of the intracellularly expressed Rv1057 gene, encodina a seven-bladed beta-propeller. J Bact 188: 150-159. Abstract & fulltext for subscribers, free after 6/06.
  37. Haynes KA, Caudy AA, Elgin SCR. 2006. A copy of repetitive element 1360 is required for silencing of a pericentric transgene in Drosophila melanogaster. FASEB J 20: A468.
  38. Haynes KA, Caudy AA, Collins L, Elgin SC. 2006. Element 1360 and RNAi components contribute to HP1-dependent silencing of a pericentric reporter. Curr Biol 16:2222-7. PubMed abstract & fulltext for subscribers.
  39. Herzog ED, Muglia LJ. 2006. You are when you eat. Nat Neurosci 9:300-2. PubMed citation & fulltext for subscribers.
  40. Hickman CP, Jr., Roberts LS, Larson A, I'Anson H, Eisenhour DJ. 2006. Integrated Principles of Zoology, 13th ed. McGraw-Hill Higher Education, Boston. 882 pp. More book info. [missing from collected volume]
  41. Huisinga KL, Brower-Toland B, Elgin SC. 2006. The contradictory definitions of heterochromatin: transcription and silencing. Chromosoma 115: 110-122. PubMed abstract & fulltext for subscribers.
  42. Johnson MA, Kirby R, Wang S, Losos JB. 2006. What drives variation in habitat use by Anolis lizards: habitat availability or selectivity? Can J Zool 84:877-886. Abstract & fulltext for subscribers.
  43. Joly S, Starr JR, Lewis WH, Bruneau A. 2006. Polyploid and hybrid evolution in roses east of the Rocky Mountains. Am J Bot 93: 412-425. Abstract & fulltext for subscribers.
  44. Kaewsuwan S, Cahoon EB, Perroud PF, Wiwat C, Panvisavas N, Quatrano RS, Cove DJ, Bunyapraphatsara N. 2006. Identification and functional characterization of the moss Physcomitrella patens delta5-desaturase gene involved in arachidonic and eicosapentaenoic acids biosynthesis. J Biol Chem 281:21988-21997. PubMed abstract & fulltext for subscribers; free Jan. 2008.
  45. Kamisugi Y, Schlink K, Rensing SA, Schween G, von Stackelberg M, Cuming AC, Reski R, Cove DJ. 2006. The mechanism of gene targeting in Physcomitrella patens: homologous recombination, concatenation and multiple integration. Nucleic Acids Res 34:6205-14. PubMed abstract & freely available fulltext.
  46. Kashino Y, Inoue-Kashino N, Roose JL, Pakrasi HB. 2006. Absence of the PsbQ protein results in destabilization of the PsbV protein and decreased oxygen evolution activity in cyanobacterial Photosystem II. J Biol Chem 281:20834-41. PubMed abstract & fulltext for subscribers, free 1/08.
  47. Kearney M, Blacket MJ, Strasburg JL, Moritz C. 2006. Waves of parthenogenesis in the desert: evidence for the parallel loss of sex in a grasshopper and a gecko from Australia. Mol Ecol 15: 1743-1748. Abstract & fulltext for subscribers.
  48. Kim HJ, Ryu H, Hong SH, Woo HR, Lim PO, Lee IC, Sheen J, Nam HG, Hwang I. 2006. Cytokinin-mediated control of leaf longevity by AHK3 through phosphorylation of ARR2 in Arabidopsis. Proc Natl Acad Sci 103: 814-819. Abstract & fulltext for subscribers, free after 5/06.
  49. Kindle L, Rothe L, Kriss M, Osdoby P, Collin-Osdoby P. 2006. Human microvascular endothelial cell activation by IL-1 and TNF-alpha stimulates the adhesion and transendothelial migration of circulating human CD14(+) monocytes that develop with RANKL into functional osteoclasts. J Bone Mineral Res 21:193-206. Abstract & fulltext for subscribers.
  50. Kindle L, Kriss M, Rothe L, Osdoby PA, Collin-Osdoby PA. 2006. SDF-1 and inflammatory cytokines collaborate to promote transendothelial migration of circulating human CD14+monocytes, resulting in greater osteoclast formation and bone resorption by recruited cells. J Bone Miner Res 21:S261 Suppl. 1.
  51. Kirk DL. 2006. Oogamy: inventing the sexes. Curr Biol 16(24):R1028-30. PubMed abstract & fulltext for subscribers.
  52. Kneitel J, Perrault D. 2006. Disturbance-induced changes in community composition increase species invasion success. Community Ecology 7: 245-252. [missing from collected volume]
  53. Knight TM, Chase JM, Hillebrand H, Holt RD. 2006. Predation on mutualists can reduce the strength of trophic cascades. Ecol Lett 9 :1173-8. Abstract & fulltext for subscribers.
  54. Knight TM, Steets JA, Ashman TL. 2006. A quantitative synthesis of pollen supplementation experiments highlights the contribution of resource reallocation to estimates of pollen limitation. Am J Bot 93: 271-277. Abstract & fulltext for subscribers.
  55. Knouft JH, Losos JB, Glor RE, Kolbe JJ. 2006. Phylogenetic analysis of the evolution of the niche in lizards of the Anolis sagrei group. Ecology 87:S29-38. PubMed abstract | Fulltext for subscribers.
  56. Konjufca V, Wanda SY, Jenkins MC, Curtiss R 3rd. 2006. Recombinant attenuated Salmonella enterica Serovar Typhimurium vaccine encoding Eimeria acervulina antigen offers protection against E.acervulina challenge. Infect Immun 74:6785-96. PubMed abstract & fulltext for subscribers, free after 4/07.
  57. Koropatkin NM, Pakrasi HB, Smith TJ. 2006. Atomic structure of a nitrate-binding protein crucial for photosynthetic productivity. Proc Natl Acad Sci 103:9820-9825. PubMed abstract & fulltext for subscribers, free after Dec. 2006.
  58. Kouassi NK, Chen L, Sire C, Bangratz-Reyser M, Beachy RN, Fauquet CM, Brugidou C. 2006. Expression of rice yellow mottle virus coat protein enhances virus infection in transgenic plants. Arch Virol 151:2111-2122. PubMed abstract & fulltext for subscribers.
  59. Kowalczyk CA, Anderson AM, Arce-Larreta M, Chalker DL. 2006. The germ line limited M element of Tetrahymena is targeted for elimination from the somatic genome by a homology-dependent mechanism. Nucleic Acids Res 34:5778-89. PubMed abstract & free fulltext
  60. Kozak KH, Blaine RA, Larson A. 2006. Gene lineages and eastern North American palaeodrainage basins: phylogeography and speciation in salamanders of the Eurycea bislineata species complex. Mol Ecol 15(1):191-207. Abstract & fulltext for subscribers.
  61. Kozak KH, Weisrock DW, Larson A. 2006. Rapid lineage accumulation in a non-adaptive radiation: phylogenetic analysis of diversification rates in eastern North American woodland salamanders (Plethodontidae : Plethodon). Proc Roy Soc B Biol Sci 273: 539-546. PubMed abstract & fulltext for subscribers, free after 3/07.
  62. Kunkel BN, Chen Z. 2006. Virulence strategies of plant pathogenic bacteria. pp. 421–440 IN The Prokaryotes: v.2: Ecophysiology and Biochemistry. Springer. Fulltext at Springer EBooks.
  63. Kuo HF, Olsen KM, Richards EJ. 2006. Natural variation in a subtelomeric region of Arabidopsis: implications for the genomic dynamics of a chromosome end. Genetics 173:401-17. PubMed abstract & fulltext for subscribers, free 3 months after publication.
  64. Langerhans RB, Knouft JH, Losos JB. 2006. Shared and unique features of diversification in greater Antillean Anolis ecomorphs. Evolution 60: 362-369. Abstract & fulltext for BioOne subscribers.
  65. Larson A. 2006. Alaska wilderness: Exploring the Central Brooks Range.by Robert Marshall [book review] Hist Philos Life Sci 28:445-446.
  66. Larson A. 2006. Historical biogeography: An introduction. by Jorge V. Crisci [book review] Hist Philos Life Sci 28: 109-110.
  67. Laurie-Berry N, Joardar V, Street IH, Kunkel BN. 2006. The Arabidopsis thaliana JASMONATE INSENSITIVE 1 gene is required for suppression of salicylic acid-dependent defenses during infection by Pseudomonas syringae. Mol Plant Microbe Interact 19: 789-800. PubMed abstract | Abstract & fulltext for subscribers, free 2 years after publication. [WU does not have online subscription]
  68. Leone MJ, Marpegan L, Bekinschtein TA, Costas MA, Golombek DA. 2006. Suprachiasmatic astrocytes as an interface for immune-circadian signalling. J Neurosci Res 84:1521-7. PubMed abstract & fulltext for subscribers; free 18 months after publication.
  69. Lewis WH. 2006. Hedyotis australis (Rubiaceae) new to Missouri and Florida and related species in the south-central United States. SIDA, Contributions to Botany 22:831-836.
  70. Li CF, Pontes O, El-Shami M, Henderson IR, Bernatavichute YV, Chan SW, Lagrange T, Pikaard CS, Jacobsen SE. 2006. An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana. Cell 126:93-106. PubMed abstract & fulltext for subscribers.
  71. Liberton M, Howard Berg R, Heuser J, Roth R, Pakrasi HB. 2006. Ultrastructure of the membrane systems in the unicellular cyanobacterium Synechocystis sp. strain PCC 6803. Protoplasma. 227:129-38. PubMed abstract & fulltext for subscribers; Supplementary material.
  72. Londo JP, Chiang YC, Hung KH, Chiang TY, Schaal BA. 2006. Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa. Proc Natl Acad Sci 103:9578-83. PubMed abstract & fulltext for subscribers, free after Dec. 2006.
  73. Losos JB, Glor RE, Kolbe JJ, Nicholson K. 2006. Adaptation, speciation, and convergence: A hierarchical analysis of adaptive radiation in Caribbean Anolis lizards. Ann Missouri Bot Garden 93: 24-33. Abstract.
  74. Losos JB, Schoener TW, Langerhans RB, Spiller DA. 2006. Rapid temporal reversal in predator-driven natural selection. Science 314:1111. PubMed abstract & fulltext for subscribers.
  75. Macey JR, Schulte II JA, Strasburg JL, Brisson JA, Larson A, Ananjeva NB, Wang Y, Parham JF, Papenfuss TJ. 2006. Assembly of the eastern North American herpetofauna: New evidence from lizards and frogs. Biology Letters 2: 388-392. Abstract & fulltext for subscribers; free 1 year after publication.
  76. Marella HH, Sakata Y, Quatrano RS. 2006. Characterization and functional analysis of ABSCISIC ACID INSENSITIVE3-like genes from Physcomitrella patens. Plant J 46: 1032-1044. PubMed abstract & fulltext for subscribers, free after Dec. 2007.
  77. McCauley DJ, Keesing F, Young TP, Allan BF, Pringle RM. 2006. Indirect effects of large herbivores on snakes in an African savanna. Ecology 87: 2657-2663. Abstract & fulltext for subscribers.
  78. McCoy MW, Bolker BM, Osenberg CW, Miner BG, Vonesh JR. 2006. Size correction: Comparing morphological traits among populations and environments. Oecologia 148: 547-554. Abstract & fulltext for subscribers.
  79. Mellgren EM, Johnson SL. 2006. pyewacket, a new zebrafish fin pigment pattern mutant. Pigment Cell Res 19: 232-238. PubMed abstract & fulltext for subscribers.
  80. Melville J, Harmon LJ, Losos JB. 2006. Intercontinental community convergence of ecology and morphology in desert lizards. Proc Biol Sci 273:557-63. PubMed abstract & fulltext for subscribers, free after 3/07.
  81. Miller AJ, Schaal BA. 2006. Domestication and the distribution of genetic variation in wild and cultivated populations of the Mesoamerican fruit tree Spondias purpurea L. (Anacardiaceae). Mol Ecol 15: 1467-1480. Abstract & fulltext for subscribers.
  82. Mitreva M, Wendl MC, Martin J, Wylie T, Yin Y, Larson A, Parkinson J, Waterston RH, McCarter JP. 2006. Codon usage patterns in Nematoda: Analysis based on over 25 million codons in thirty-two species. Genome Biol 7:R75. Freely available fulltext.
  83. Neff MM, Street IH, Turk EM, Ward JM. 2006. Interaction of light and hormone signalling to mediate photomorphogenesis. pp. 439-473 IN E. Schäfer, F. Nagy, eds, Photomorphogenesis in Plants and Bacteria, 3rd Edition, Springer. Fulltext for Springer EBook subscribers | More book info.
  84. Nicholson KE, Mijares-Urrutia A, Larson A. 2006. Molecular phylogenetics of the Anolis onca series: a case history in retrograde evolution revisited. J Exp Zoolog B Mol Dev Evol 306B:450-459. PubMed abstract & fulltext for subscribers.
  85. Noguchi T, Lenartowska M, Miller KG. 2006. Myosin VI stabilizes an actin network during drosophila spermatid individualization. Mol Biol Cell 17:2559-2571. PubMed abstract & fulltext for subscribers, freely available 2 months after publication; Supplemental material.
  86. Olsen KM, Schaal BA. 2006. DNA sequence data and inferences on Cassava's origin of domestication. pp. 123-133 IN Documenting domestication : new genetic and archaeological paradigms. More book info.
  87. Olsen KM, Caicedo AL, Polato N, McClung A, McCouch S, Purugganan MD. 2006. Selection under domestication: evidence for a sweep in the rice waxy genomic region. Genetics 173: 975-983. PubMed abstract & fulltext for subscribers; free after 9/07.
  88. Östman Ö, Kneitel JM, Chase JM. 2006. Disturbance alters habitat isolation's effect on biodiversity in aquatic microcosms. Oikos 114:360-366. Abstract & fulltext for subscribers | PDF.
  89. Perroud PF, Quatrano RS. 2006. The role of ARPC4 in tip growth and alignment of the polar axis in filaments of Physcomitrella patens. Cell Motil Cytoskeleton 63(3):162-71. PubMed abstract & fulltext for subscribers.
  90. Petruccelli S, Otegui MS, Lareu F, Tran Dinh O, Fitchette AC, Circosta A, Rumbo M, Bardor M, Carcamo R, Gomord V, Beachy RN. 2006. A KDEL-tagged monoclonal antibody is efficiently retained in the endoplasmic reticulum in leaves, but is both partially secreted and sorted to protein storage vacuoles in seeds. Plant Biotechnol J 4:511-27. Abstract & fulltext for subscribers.
  91. Pikaard CS. 2006. Cell biology of the Arabidopsis nuclear siRNA pathway for RNA-directed chromatin modification. Cold Spring Harb Symp Quant Biol 71:473-80. Abstract & fulltext for subscribers.
  92. Pimm S, Raven P, Peterson A, Sekercioglu CH, Ehrlich PR. 2006. Human impacts on the rates of recent, present, and future bird extinctions. Proc Natl Acad Sci U S A 103:10941-6. PubMed abstract & fulltext for subscribers, free after 12/06.
  93. Pontes O, Li CF, Nunes PC, Haag J, Ream T, Vitins A, Jacobsen SE, Pikaard CS. 2006. The arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center. Cell 126:79-92. PubMed abstract & fulltext for subscribers.
  94. Posada D, Crandall KA, Templeton AR. 2006. Nested clade analysis statistics. Mol Ecol Notes 6: 590-593. Abstract & fulltext for subscribers.
  95. Preuss ML, Schmitz AJ, Thole JM, Bonner HKS, Otegui MS, Nielsen E. 2006. A role for the RabA4b effector protein PI-4K beta 1 in polarized expansion of root hair cells in Arabidopsis thaliana. J Cell Biol 172: 991-998. Abstract, supplementary material & fulltext for subscribers, freely available after 8/06.
  96. Rangwala SH, Elumalai R, Vanier C, Ozkan H, Galbraith DW, Richards EJ. 2006. Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon. PLoS Genet 2:270-281 (e36). PubMed abstract & freely available fulltext.
  97. Raven P, Fauquet C, Swaminathan MS, Borlaug N, Samper C. 2006. Where next for genome sequencing? Science 311:468. PubMed citation & fulltext for subscribers.
  98. Richards EJ. 2006. Inherited epigenetic variation - revisiting soft inheritance. Nat Rev Genet 7:395-401. PubMed abstract & fulltext for subscribers.
  99. Riddle NC, Elgin SC. 2006. The dot chromosome of Drosophila: Insights into chromatin states and their change over evolutionary time. Chromosome Res 14:405-16. PubMed abstract & fulltext for subscribers.
  100. Rojas R, Caviedes L, Aponte JC, Vaisberg AJ, Lewis WH, Lamas G, Sarasara C, Gilman RH, Hammond GB. 2006. Aegicerin, the first oleanane triterpene with wide-ranging antimycobacterial activity, isolated from Clavija procera. J Nat Prod 69:845-846. PubMed abstract & fulltext for subscribers.
  101. Rosenberg S, Templeton AR, Feigin PD, Lancet D, Beckmann JS, Selig S, Hamer DH, Skorecki K. 2006. The association of DNA sequence variation at the MAOA genetic locus with quantitative behavioural traits in normal males. Hum Genet 120:447-59. PubMed abstract & fulltext for subscribers.
  102. Sadekar S, Raymond J, Blankenship RE. 2006. Conservation of distantly related membrane proteins: Photosynthetic reaction centers share a common structural core. Mol Biol Evol 23 : 2001-2007. Abstract & fulltext for subscribers, free after 11/2007.
  103. Sanger TJ. 2006. Tinkering: a metaphor uniting evolutionary and developmental biology. Bioessays 28:1221-1223. PubMed citation & fulltext for subscribers.
  104. Savitskaya E, Melnikova L, Kostuchenko M, Kravchenko E, Pomerantseva E, Boikova T, Chetverina D, Parshikov A, Zobacheva P, Gracheva E, Galkin A, Georgiev P. 2006. Study of long-distance functional interactions between Su(Hw) insulators that can regulate enhancer-promoter communication in Drosophila melanogaster. Mol Cell Biol 26: 754-761. Abstract & fulltext for subscribers, free after 7/06.
  105. Schaal B, Olsen K, Carvalho L. 2006. Evolution, domestication and agrobiodiversity in the tropical crop, cassava. IN T. J. Motley, N. Zerega, and H. Cross, eds. Darwin's Harvest: New Approaches to the Origins, Evolution, and Conservation of Crops. Columbia Univ. Press.
  106. Shaffer CD, Cenci G, Thompson B, Stephens GE, Slawson EE, Adu-Wusu K, Gatti M, Elgin SC. 2006. The large isoform of Drosophila melanogaster heterochromatin protein 2 plays a critical role in gene silencing and chromosome structure. Genetics 174:1189-204 PubMed abstract & fulltext for subscribers, free after 2/07.
  107. Singh AK, Summerfield TC, Li H, Sherman LA. 2006. The heat shock response in the cyanobacterium Synechocystis sp. Strain PCC 6803 and regulation of gene expression by HrcA and SigB. Arch Microbiol 186 :273-86. PubMed abstract & fulltext for subscribers.
  108. Slawson EE, Shaffer CD, Malone CD, Leung W, Kellmann E, Shevchek RB, Craig CA, Bloom SM, Bogenpohl J 2nd, Dee J, Morimoto ET, Myoung J, Nett AS, Ozsolak F, Tittiger ME, Zeug A, Pardue ML, Buhler J, Mardis ER, Elgin SC. 2006. Comparison of dot chromosome sequences from D. melanogaster and D. virilis reveals an enrichment of DNA transposon sequences in heterochromatic domains. Genome Biol 7:R15. PubMed abstract & free fulltext.
  109. Sreedharan A, Penaloza-Vazquez A, Kunkel BN, Bender CL. 2006. CorR regulates multiple components of virulence in Pseudomonas syringae pv. tomato DC3000. Mol Plant Microbe Interact 19: 768-779. Abstract & supplementary figures & fulltext for subscribers, free 2 years after publication. [WU does not have online subscription]
  110. Stephens GE, Xiao H, Lankenau DH, Wu C, Elgin SC. 2006. Heterochromatin protein 2 interacts with Nap-1 and NURF: a link between heterochromatin-induced gene silencing and the chromatin remodeling machinery in Drosophila. Biochemistry 45:14990-14999. PubMed abstract & fulltext for subscribers; free after 12/07.
  111. Templeton AR. 2006. Population genetics and microevolutionary theory. Wiley. More book info.
  112. Vamosi JC, Knight TM, Steets JA, Mazer SJ, Burd M, Ashman TL. 2006. Pollination decays in biodiversity hotspots. Proc Natl Acad Sci 103: 956-961. Abstract & fulltext for subscribers, free after 7/06.
  113. Vellend M, Knight TM, Drake JM. 2006. Antagonistic effects of seed dispersal and herbivory on plant migration. Ecol Lett 9: 316-323. Abstract & fulltext for subscribers.
  114. Walters JJ, Grayson MA, Gross ML, Hughes M, Shearer G, Kohl DH, Bashkin J. 2006. Ion-exchange chromatography followed by ESI-MS for quantitative analysis of sugar monophosphates from glucose catabolism. J Amer Soc Mass Spectrometry 17:104-107. Abstract & fulltext for subscribers.
  115. Ward JM, Smith AM, Shah PK, Galanti SE, Yi H, Demianski AJ, van der Graaff E, Keller B, Neff MM. 2006. A new role for the arabidopsis AP2 transcription factor, LEAFY PETIOLE, in gibberellin-induced germination is revealed by the misexpression of a homologous gene, SOB2/DRN-LIKE. Plant Cell 18 (1): 29-39. PubMed abstract & fulltext for subscribers, free after 12/06.
  116. Weisrock DW, Papenfuss TJ, Macey JR, Litvinchuk SN, Polymeni R, Ugurtas IH, Zhao E, Jowkar H, Larson A. 2006. A molecular assessment of phylogenetic relationships and lineage accumulation rates within the family Salamandridae (Amphibia, Caudata). Mol Phylogenet Evol 41: 368-383. PubMed abstract & fulltext for subscribers.
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