Washington Univ. Biology Department - 1998 - Collected Publications

Allen, G.E. "Genetics and Behavior" in Encyclopedia of Applied Ethics, v.2. Ed. by R. Chadwick. (San Diego:Academic Press, 1998): pp.435-443.

Allen, G.E. "Nature Versus Nurture" in Encyclopedia of Applied Ethics, v.3. Ed. by R. Chadwick. (San Diego:Academic Press, 1998) pp.323-334.

Boch, J., Verbsky, M.L., Robertson, T.L., Larkin, J.C. and Kunkel, B. N. "Analysis of Resistance Gene-MeditedMediated Defense Responses in Arabidopsis thalania Plants Carrying a Mutation in CPR5" Molecular Plant-Microbe Interactions 11:12 (1998): 1196-1206.

Bowman, W. C. and Kranz, R.G. "A Bacterial ATP-Dependent, Enhancer Binding Protein that Activates the Housekeeping RNA Polymerase" Genes and Development 12 (1998): 1884-1893 -- pdf.

Braude, S. and Ciszek, D. "Survival of Naked Mole-Rats Marked by Implantable Transponders and Toe-Clipping" Journal of Mammalogy 79:1 (1998): 360-363.

Burns-Keliher, L., Nickerson, C. A., Morrow, B.J. and Curtiss, R. III "Cell-Specific Proteins Synthesized by Salmonella typhimurium" Infection and Immunity 66:2 (1998): 856-861 -- pdf.

Chen, Z.J., Comai, L., and Pikaard, C. S. "Gene Dosage and Stochastic Effects Determine the Severity and Direction of Uniparental Ribosomal RNA Gene Silencing (Nucleolar Dominance) in Arabidopsis Allopolyploids" Proceedings of the National Academy of Sciences 95 (1998): 14891-14896 -- pdf.

Cho, Y.S., Pakrasi, H.B., and Whitmarsh, J. "Cytochrome cm from Synechocystis 6803: Overexpression in E. coli" in Photosynthesis: Mechanisms and Effects, Vol.3. Ed. by G. Garab. (Dordrecht, Kluwer Academic Publishers, 1998): pp.1505-1510.

Cobos, J. A., Yang, J., Zhang, R., Krukowski, M., and Simmons, D. J. "Positively Charged Dextran Resin Inhibits Trabecular Bone Repair in the Rabbit Tibial Physis" Journal of Biomedical Materials Research 39 (1998): 458-461.

Collin-Osdoby, P., Li, L., Rothe, L., Anderson, F., Kirsch, D., Oursler, M.J., and Osdoby, P. "Inhibition of Avian Osteoclast Bone Resorption by Monoclonal Antibody 121F: A Mechanism Involving the Osteoclast Free Radical System" Journal of Bone and Mineral Research 13:1 (1998): 67-78.

Cryderman, D.E., Cuaycong, M.H., Elgin, S.C.R., and Wallrath, L. "Characterization of Sequences Associated with Position-Effect Variegation at Pericentric Sites in Drosophila Heterochromatin" Chromosoma 107 (1998): 277-285.

Cullen, P.J., Bowman, W.C., Hartnett, D.-F., Reilly, S.C., and Kranz, R.G. "Translational Activation by an NtrC Enhancer-Binding Protein" Journal of Molecular Biology 278 (1998): 903-914.

DeQueiroz, K., Chu, L.-R., and Losos, J.B. "A Second Anolis Lizard in Dominican Amber and the Systematics and Ecological Morphology of Dominican Amber Anoles" American Museum Novitates 3249 (1998): 1-23.

Duncan, D.D., Burgess, E.A., and Duncan, I. "Control of Distal Antennal Identity and Tarsal Development in Drosophila by Spineless-Aristapedia, a Homolog of the Mammalian Dioxin Receptor" Genes and Development 12 (1998): 1290-1303.

Fitzpatrick, D.C., Olsen, J.F., and Suga, N. "Connections among Functional Areas in the Mustached Bat Auditory Cortex" Journal of Comparative Neurology 391 (1998): 366-396.

Fitzpatrick, D.C., Suga, N. and Olsen, J.F. "Distribution of Response Types Across Entire Hemispheres of the Mustached Bat's Auditory Cortex" Journal of Comparative Neurology 391 (1998): 353-365.

Gao, E. and Suga, N. "Experience-Dependent Corticofugal Adjustment of Midbrain Frequency Map in Bat Auditory System" Proceedings of the National Academy of Sciences 95 (1998): 12663-12670.

Gibson-Brown, J.J., Agulnik, S.I., Silver, L.M., and Papaioannou, V.E. "Expression of T-Box Genes Tbx2-Tbx5 during Chick Organogenesis" Mechanisms of Development 74 (1998): 165-169.

Gibson-Brown, J.J., Agulnik, S.I., Silver, L.M., Niswander, L., and Papaioannou, V.E. "Involvement of T-Box Genes Tbx2-Tbx5 in Vertebrate Limb Specification and Development" Development 125 (1998): 2499-2509.

Goessling, L.S., Mascotti, D.P., and Thach, R.E. "Involvement of Heme in the Degradation of Iron-Regularory Protein 2*" Journal of Biological Chemistry 273:20 (1998): 12555-12557.

Goldman, B.S. and Kranz, R.G. "Evolution and Horizontal Transfer of an Entire Biosynthetic Pathway for Cytochrome c Biogenesis: Helicobacter, Deinococcus, Archae and More" Molecular Microbiology 27:4 (1998): 871-874.

Goldman, B.S., Beck, D.L., Monika, E.M. and Kranz, R.G. "Transmembrane Heme Delivery Systems" Proceedings of the National Academy of Sciences 95 (April, 1998): 5003-5008.

Goldstein, W.A., Scully, M.J., Kohl, D.H. and Shearer, G. "Impact of Agricultural Management on Nitrate Concentrations in Drainage Waters" American Journal of Alternative Agriculture 13:3 (1998): 105-110.

Goodenough, U. The Sacred Depths of Nature (New York: Oxford University Press: 1998) 197 pp.

Grey, W. T., Lasker, J.D., Curtiss, R. III and Hudson, M.C. "Expression of Streptococcal Gene Expression in the Mammalian Environment" Methods in Cell Science 20 (1998): 137-142.

Hammer, M.F., Karafet, T., Rasanayagam, A., Wood, E.T., Altheide, T.K., Jenkins, T., Griffiths, R.C., Templeton, A.R. and Zegura, S. L. "Out of Africa and Back Again: Nested Cladistic Analysis of Human Y Chromosome Variation" Molecular Biology and Evolution 15:4 (1998): 427-441.

Heinlein, M., Padgett, H.S., Gens, J.S., Pickard, B.G., Casper, S.J., Epel, B.L., and Beachy, R.N. "Changing Patterns of Localization of the Tobacco Mosaic Virus Movement Protein and Replicase to the Endoplasmic Reticulum and Microtubules during Infection" The Plant Cell 10 (July, 1998): 1107-1120.

Herzog, E.D., Takahashi, J.S., and Block, G.D. "Clock Controls Circadian Period in Isolated Suprachiasmatic Nucleus Neurons" Nature Neuroscience 1:8 (Dec., 1998): 708-713.

Hickman, C.P., Jr., Roberts, L.S., and Larson, A. Biology of Animals, 7th ed. (Boston, MA:WCB/McGraw-Hill: 1998) 766 pp.

Hunter, S.J., Gay, C.V., Osdoby, P.A., and Peters, L.L. "Spectrin Localization in Osteoclasts: Immunocytochemistry, Cloning, and Partial Sequencing" Journal of Cellular Biochemistry 71 (1998): 204-215.

Irschick, D.J. and Losos, J. B. "A Comparative Analysis of the Ecological Significance of Maximal Locomotor Performance in Caribbean Anolis Lizards" Evolution 52:1 (1998): 219-226.

Jeddeloh, J.A., Bender, J. and Richards, E.R. "The DNA Methylation Locus DDM1 Is Required for Maintenance of Gene Silencing in Arabidopsis" Genes and Development 12 (1998): 1714-1725.

Jinks, R.N., Battelle, B.-A., Herzog, E.D., Kass, L., Renninger, G.H. and Chamberlain, S.C. "Sensory Adaptations in Hydrothermal Vent Shrimps from the Mid-Atlantic Ridge" Cahiers de Biologie Marine 39 (1998): 309-312.

Kaniga, K., Compton, M.S., Curtiss, R. III, and Sundaram, P. "Molecular and Functional Characterization of Salmonella enterica Serovar Typhimurium poxA Gene: Effect on Attenuation of Virulence and Protection" Infection and Immunity 66:12 (Dec., 1998): 5599-5606.

Kellum, R. and Elgin, S.C.R. "Chromatin Boundaries: Punctuating the Genome" Current Biology 8 (1998): R521-R524.

Kirk, D.L. Volvox : Molecular-Genetic Origins of Multicellularity and Cellular Differentiation (Cambridge, UK:Cambridge University Press: 1998): 381 pp.

Kobl, I., Kirk, D.L., and Schmitt, R. "Quantitative PCR Data Falsify the Chromosomal Endoreduplication Hypothesis for Volvox Carteri (Volvocales, Chlorophyta)" Journal of Phycology 34 (1998): 981-988.

Kohl, D. "Barry Commoner's Science: an Anecdotal Overview" New Solutions: A Journal of Environmental and Occupational Health Policy 8:1 (1998): 47-58.

Kranz, R.G., Lill, R., Goldman, B., Bonnard, G. and Merchant, S. "Molecular Mechanisms of Cytochrome c Biogenesis: Three Distinct Systems" Molecular Microbiology 29:2 (1998): 383-396.

Lantz, V.A. and Miller, K. G. " A Class VI Unconventional Myosin Is Associated with a Homologue of a Microtubule-Binding Protein, Cytoplasmic Linker Protein-170, in Neurons and at the Posterior Pole of Drosophila Embryos" The Journal of Cell Biology 140:4 (Feb.23, 1998): 897-910.

Larson, A. "The Comparison of Morphological and Molecular Data in Phylogenetic Systematics" in Molecular Approaches to Ecology and Evolution. Ed. by R. DeSalle and B. Schierwater. (Basel:Birkhauser Verlag, 1998): pp.275-296.

Larson, A. "John Tyler Bonner's Sixty Years of Biology:Essays on Evolution and Development. (Book Review)" History and Philosophy of the Life Sciences 20 (1998) 359-361.

Leal, M., Rodriquez-Robles, J.A., and Losos, J.B. "An Experimental Study of Interspecific Interactions Between Two Puerto Rican Anolis Lizards" Oecologia 117 (1998): 273-278.

Levin, P.A. and Grossman, A.D. "Cell Cycle and Sporulation in Bacillus subtilis" Current Opinion in Microbiology 1 (1998): 630-635.

Levin, P.A. "Cell Cycle: The Bacterial Approach to Coordination" Current Biology 1 (1998): R28-R31.

Levin, P.A., Shim, J.J., and Grossman, A.D. "Effect of minCD on FtsZ Ring Position and Polar Septation in Bacillus subtilis" Journal of Bacteriology 180:22 (Nov., 1998): 6048-6051.

Lewis, W.H., Dixit, A.B., Wedner, H.J. and Crozier, W.A. "Airborne and Allergenic Tree Pollen of the Texas Gulf Coast (USA)" in Current Concepts in Pollen-Spore and Biopollution Research. Ed. by N.M. Dutta, S. Gupta-Bhattacharya, S. Mandal and K. Bhattacharya (Houston. TX:Research Periodicals and Book Publishing House: 1998): pp.319-335.

Lewis, W.H. "Message, Prof. Sunirmal Chanda 60th Birth Anniversary Felicitation Vol..7-8" in Current Concepts in Pollen-Spore and Biopollution Research. Ed. by N.M. Dutta, S. Gupta-Bhattacharya, S. Mandal, and K. Bhattacharya (Houston, TX: Research Periodicals and Book Publishing House: 1998): pp.7-8.

Lewis, W.H. and Nowicke, J.W. "Royce L. Oliver Who Lived Botany" ASPT Newsletter 12:1 (1998): 10-11.

Losos, J.B., Jackman, T.R., Larson, A., deQueiroz, K., and Rodriguez-Schettino, L. "Contingency and Determinism in Replicated Adaptive Radiations of Island Lizards" Science 279 (March 27, 1998): 2115-2118.

Losos, J.B. and Chu, L.-R. "Examination of Factors Potentially Affecting Dewlap Size in Caribbean Anoles" Copeia 1998:2 (1998): 430-438.

Macey, J.R., Schulte, J. A. II, Ananjeva, N.B., Larson, A., Rastegar-Pouyani, N., Shammakov, S.M., and Papenfuss, T. J. "Phylogenetic Relationships among Agamid Lizards of the Laudakia caucasia Species Group: Testing Hypotheses of Biogeographic Fragmentation and an Area Cladogram for the Iranian Plateau" Molecular Phylogenetics and Evolution 10:1 (August, 1998): 118-131.

Macey, J.R., Schulte, J.A.II, Larson, A., Fang, Z., Wang, Y., Tuniyev, B.S., and Papenfuss, T.J. "Phylogenetic Relationships of Toads in the Bufo bufo Species Group from the Eastern Escarpment of the Tibetan Plateau: a Case of Vicariance and Dispersal" Molecular Phylogenetics and Evolution 9:1 (February, 1998): 80-87.

Macey, J.R., Schulte, J.A. II, Larson, A., and Papenfuss, T. J. "Tandem Duplication Via Light-Strand Synthesis May Provide a Precursor for Mitochondrial Genomic Rearrangement" Molecular Biology and Evolution 15:1 (1998): 71-75.

Markham, R.B., Wang, W.-C., Weisstein, A. E., Wang, Z., Munoz, A., Templeton, A., Margolick, J., Vlahov, D., Quinn, T., Farzadegan, H. and Yu. X.-F. "Patterns of HIV-I Evolution in Individuals with Differing Rates of CD4 T Cell Decline" Proceedings of the National Academy of Sciences 95 (Oct., 1998): 12568-12573.

Meyer, P.N., Wilmes-Riesenberg. M.R.,, Stathopoulos, C., and Curtiss, R. III. " Virulence of a Salmonella typhimurium OmpD Mutant" Infection and Immunity 66:1 (Jan., 1998): 387-390.

Nayak, A. R., Tinge, S.A., Tart, R.C., McDaniel, L.S., Briles, D.E., and Curtiss, R.III. "A Live Recombinant Avirulent Oral Salmonella Vaccine Expressing Pneumococcal Surface Protein A Induces Protective Responses Against Streptococcus pneumoniae" Infection and Immunity 66:8 (Aug,, 1998): 3744-3751.

Neff, M.M., Neff, J.D., Chory, J. and Pepper. A.E. "dCAPS, a Simple Technique for the Genetic Analysis of Single Nucleotide Polymorphisms: Experimental Applications in Arabidopsis thaliana Genetics" The Plant Journal 14:3 (1998): 387-392.

Neff, M.M. and Chory, J. "Genetic Interactions Between Phytochrome A, Phytochrome B, and Cryptochrome 1 During Arabidopsis Development" Plant Physiology 118 (1998): 27-36.

Norling, B., Zak, E., Andersson, B, and Pakrasi, H.B. "Studies on the Compartmentation of Proteins Between Thylakoid and Plasma Membranes in the Cyanobacterium Synechocystis 6803 Using Purified Fractions" in Photosynthesis:Mechanisms and Effects, vol.IV. Ed. by G. Garab. (Dordrecht:Kluwer Academic Publishers:1998): pp.3099-3102.

Norling, B. "2D-Isolation of Pure Plasma and Thylakoid Membranes from he Cyanobacterium Synechocystis sp. PCC 6803" FEBS Letters 436 (1998): 189-192.

O'Kane, S.L. and Schaal, B.A. "Phylogenetics of Lopezia (Onagraceae): Evidence from Chloroplast DNA Restriction Sites" Systematic Botany 23(1) (1998): 5-20.

Pakrasi, H.B. "C-Terminal Processing Peptidase (Cyanobacteria)" in Handbook of Proteolytic Enzymes. Ed. by A.J..Barrett, N.D. Rawlings and J.F. Woessner. (London:Academic Press:1998): pp. 462-463.

Pikaard, C.S. "Chromosome Topology - Organizing Genes by Loops and Bounds" The Plant Cell 10 (Aug., 1998): 1229-1232.

Pikaard, C.S. and Chen, Z.J. "Nucleolar Dominance" in Transcription of Ribosomal RNA Genes by Eukaryotic RNA Polymerase I. Ed. By M.R. Paule. (Georgetown, TX:R.G.Landes Company, 1998) pp.277-294.

Quatrano, R.S. "Surface Control of Cell Polarity, the Plane of Cell Division, and Cell Fate in Fucus Embryos" in Cellular Integration of Signalling Pathways in Plant Development. Ed. By F. Lo Schiavo, R. L. Last, G. Morelli, and N. V. Raikhel. (Berlin:Springer-Verlag, 1998) pp. 189-194.

Richards, E.J. and Dawe, R. K. "Plant Centromeres: Structure and Control" Current Opinion in Plant Biology 1 (1998): 130-135.

Rothe, L., Collin-Osdoby, P, Chen, Y., Sunyer, T., Chaudhary, L., Tsay, A., Goldring, S., Avioli, L. and Osdoby, P. "Human Osteoclasts and Osteoclast-Like Cells Synthesize and Release High Basal and Inflammatory Stimulated Levels of the Potent Chemokine Interleukin-8" Endocrinology 139:10 (1998): 4353-4363. Rothe, L. "Inhibition of Avian Osteoclast…" see: Colllin-Osdoby, P.

Schaal, B.A., Hayworth, D.A., Olsen, K.M., Rauscher, J.T., and Smith, W.A. "Phylogeographic Studies in Plants: Problems and Prospects" Molecular Ecology 7 (1998): 465-474.

Schmitt, R., Stark, K., Fabry, S. and Kirk, D.L. "Phylogenetic Relationship of Volvocine Algae to Plants and Animals" in Horizontal Gene Transfer. Ed. By M. Syvanen and I. Kado. (London:Chapman and Hall, 1998): pp.338-348.

Schulte, J.A. II, Macey, J.R., Larson, A. and Papenfuss, T.J. "Molecular Tests of Phylogenetic Taxonomies: a General Procedure and Example Using Four Subfamilies of the Lizard Family Iguanidae" Molecular Phylogenetics and Evolution 10:3 (Dec., 1998): 367-376.

Schultz, T.F., Medina, J., Hill, A., and Quatrano, R.S. "14-3-3 Proteins Are Part of an Abscisic Acid-VIVIPAROUS1 (VP1) Response Complex in Em Promoter and Interact with VP1 and EmBP1" Plant Cell 10 (May, 1998): 837-847.

Spiller, D.A, Losos, J.B., and Schoener, T.W. "Impact of a Catastrophic Hurricane on Island Populations" Science 281 (July 31, 1998): 695-697.

Stein, P.S.G. and McCullough, M.L. "Example of 2:1 Interlimb Coordination During Fictive Rostral Scratching in a Spinal Turtle" Journal of Neurophysiology 79 (1998): 1132-1134.

Stein, P.S.G., McCullough, M.L. and Currie, S.N. "Reconstruction of Flexor/Extensor Alternation during Fictive Rostral Scratching by Two-Site Stimulation in the Spinal Turtle with a Transverse Spinal Hemisection" Journal of Neuroscience 18:1 (Jan.1, 1998): 467-479.

Stein, P.S.G. "Spinal Motor Patterns in the Turtle" Annals of the New York Academy of Sciences 860 (Nov.16, 1998): 142-154.

Su, J., Shen, Q., Ho, T.-H. D, and Wu, R. "Dehydration-Stress-Regulated Transgene Expression in Stably Transformed Rice Plants" Plant Physiology 117 (1998): 913-922.

Suga, N., Yan, J. and Zhang, Y "The Processing of Species-Specific Complex Sounds by the Ascending and Descending Auditory Systems" in Central Auditory Processing and Neural Modeling. Ed. By J. Brugge and P. Poon. (New York: Plenum Publishing, 1998): pp.353-365.

Templeton, A.R. and Read, B. "Elimination of Inbreeding Depression from a Captive Population of Speke's Gazelle:Validity of the Original Statistical Analysis and Confirmation by Permutation Testing" Zoo Biology 17 (1998): 77-94.

Templeton, A.R. "Human Races: a Genetic and Evolutionary Perspective" American Anthropologist 100:3 (Sept., 1998): 632-650.

Templeton, A.R. "Linkage Mapping Versus the Candidate Gene Approach" Proceedings of the 6th World Congress on Genetics Applied to Livestock Production 26 (1998): 175-182.

Templeton, A.R. "Nested Clade Analyses of Phylogeographic Data: Testing Hypotheses about Gene Flow and Population History" Molecular Ecology 7 (1998): 381-397.

Templeton, A.R. "The Role of Molecular Genetics in Speciation Studies" in Molecular Approaches to Ecology and Evolution. Ed. by R. DeSalle and B. Schierwater (Basel: Birkhauser Verlag, 1998): pp.131-156.

Templeton, A.R. "Species and Speciation: Geography, Population Structure, Ecology, and Gene Trees" In Endless Forms:Species and Speciation Ed. by D.J. Howard and S.H. Berlocher. (Oxford:Oxford University Press, 1998): pp.32-43.

Wetherbee, R., Lind, J.L., Burke, J. and Quatrano, R.S. "The First Kiss: Establishment and Control of Initial Adhesion by Raphid Diatoms" Journal of Phycology 34 (1998): 9-15.

Yan, W. and Suga, N. "Corticofugal Modulation of the Midbrain Frequency Map in the Bat Auditory System" Nature Neuroscience 1:1 (May, 1998): 54-58.

Zak, E., Norling, B., Andersson, B., and Pakrasi, H.B. "Isolation of Inside-Out and Right-Side-Out Thylakoid Membrane Vesicles from the Cyanobacterium Synechocystis 6803" in Photosynthesis:Mechanisms and Effects, Vol.IV Ed. by G. Garab. (Dordrecht: Kluwer Academic Publishers, 1998): pp.3103-3106.